Truth always wins out over ideology in the end, whether that is a religious text or "The Science™". I've never had respect for anyone who wishes to push their ideology onto other people, whether it's a belief, a vaccine or dogma. But that's my libertarian streak showing.

It is rather telling that religions, while they believe their faith is the one true faith, tolerate other religions but have a hated for atheism, whether by the promise of eternal damnation or the death penalty.